| Package | us.nlm.vsac |
| Type | ValueSet |
| Id | Id |
| FHIR Version | R4 |
| Source | http://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.2172/expansion |
| Url | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2172 |
| Version | 20240620 |
| Status | active |
| Date | 2024-06-20T01:22:57-04:00 |
| Name | VirusesCausingEncephalitisTestsForVirusesCausingEncephalitisNucleicAcidInUnspecifiedSpecimen |
| Title | Viruses [Causing Encephalitis] (Tests for Viruses Causing Encephalitis Nucleic Acid in Unspecified Specimen) |
| Experimental | False |
| Realm | us |
| Authority | hl7 |
| Purpose | (Clinical Focus: This set of values contains codes for laboratory test names associated with Encephalitis-causing Virus),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: Encephalitis-causing Virus),(Exclusion Criteria: none) |
No resources found
| CodeSystem | |
http://loinc.org  | LOINC Code System |
| http://loinc.org | LOINC codes used in this IG |
| http://loinc.org | Logical Observation Identifiers, Names and Codes (LOINC) |
FHIR{
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"version" : "20240620",
"name" : "VirusesCausingEncephalitisTestsForVirusesCausingEncephalitisNucleicAcidInUnspecifiedSpecimen",
"title" : "Viruses [Causing Encephalitis] (Tests for Viruses Causing Encephalitis Nucleic Acid in Unspecified Specimen)",
"status" : "active",
"date" : "2024-06-20T01:22:57-04:00",
"publisher" : "CSTE Steward",
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"code" : "100982-8",
"display" : "Varicella zoster virus DNA [Log #/volume] (viral load) in Specimen by NAA with probe detection"
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{
"code" : "101567-6",
"display" : "Parainfluenza virus RNA in Specimen Document"
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"display" : "HIV 1 RNA [#/volume] (viral load) in Specimen by NAA with probe detection"
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"display" : "HIV 2 proviral DNA [Presence] in Specimen by NAA with probe detection"
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"display" : "Herpes virus 6 DNA [Presence] in Specimen by NAA with probe detection"
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"display" : "Enterovirus RNA [Presence] in Specimen by NAA with probe detection"
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"display" : "Parainfluenza virus 1 RNA [Presence] in Specimen by NAA with probe detection"
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"display" : "Parainfluenza virus 2 RNA [Presence] in Specimen by NAA with probe detection"
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"code" : "29910-7",
"display" : "Parainfluenza virus 3 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "30554-0",
"display" : "HIV reverse transcriptase gene mutations detected [Identifier]"
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"display" : "Epstein Barr virus DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
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"display" : "Cytomegalovirus DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
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"display" : "Herpes simplex virus+Varicella zoster virus DNA [Presence] in Specimen by NAA with probe detection"
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"display" : "HIV protease gene mutations detected [Identifier]"
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"display" : "Cytomegalovirus UL54 gene mutations detected [Identifier]"
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"display" : "Cytomegalovirus UL54+UL97 gene mutations detected [Identifier]"
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"code" : "33940-8",
"display" : "Herpes virus 6 DNA [Presence] in Tissue by NAA with probe detection"
},
{
"code" : "34487-9",
"display" : "Influenza virus A RNA [Presence] in Specimen by NAA with probe detection"
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{
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"display" : "HIV reverse transcriptase+protease gene mutations tested for"
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"display" : "Cytomegalovirus DNA [Units/volume] (viral load) in Specimen by NAA with probe detection"
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{
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"display" : "West Nile virus RNA [Presence] in Specimen by NAA with probe detection"
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{
"code" : "35396-1",
"display" : "Enterovirus RNA [Presence] in Tissue by NAA with probe detection"
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"code" : "35400-1",
"display" : "Varicella zoster virus DNA [Presence] in Tissue by NAA with probe detection"
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"code" : "37983-4",
"display" : "Eastern equine encephalitis virus RNA [Presence] in Specimen by Probe"
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"display" : "Saint Louis encephalitis virus RNA [Presence] in Specimen by Probe"
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"display" : "West Nile virus RNA [Presence] in Specimen by Probe"
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{
"code" : "37986-7",
"display" : "California serogroup RNA [Presence] in Specimen by Probe"
},
{
"code" : "38270-5",
"display" : "Influenza virus A H7 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "38271-3",
"display" : "Influenza virus A H6 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "38272-1",
"display" : "Influenza virus A H5 RNA [Presence] in Specimen by NAA with probe detection"
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"display" : "Herpes virus 6 DNA [Identifier] in Specimen by NAA with probe detection"
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"display" : "Herpes virus 6 DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
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"display" : "Herpes virus 6 DNA [Log #/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "38381-0",
"display" : "Influenza virus A cDNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "39025-2",
"display" : "Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by Sequencing"
},
{
"code" : "39102-9",
"display" : "Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by NAA with probe detection"
},
{
"code" : "39103-7",
"display" : "Influenza virus A neuraminidase cDNA [Identifier] in Specimen by NAA with probe detection"
},
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"code" : "39528-5",
"display" : "Adenovirus DNA [Presence] in Specimen by NAA with probe detection"
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"code" : "40444-2",
"display" : "CMV gene mutations detected [Identifier]"
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"code" : "40975-5",
"display" : "Adenovirus DNA [Identifier] in Specimen by RFLP"
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"code" : "40976-3",
"display" : "Adenovirus DNA [Identifier] in Specimen by NAA with probe detection"
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"code" : "40982-1",
"display" : "Influenza virus B RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "41003-5",
"display" : "Human coronavirus 229E RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "41010-0",
"display" : "Parainfluenza virus 4 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "44263-2",
"display" : "Influenza virus A RNA [Units/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "44264-0",
"display" : "Influenza virus A H5 RNA [Units/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "44265-7",
"display" : "Influenza virus A H6 RNA [Units/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "44266-5",
"display" : "Influenza virus A H7 RNA [Units/volume] (viral load) in Specimen by NAA with probe detection"
},
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"code" : "44423-2",
"display" : "Herpes virus 7 DNA [Presence] in Specimen by NAA with probe detection"
},
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"code" : "44795-3",
"display" : "Influenza virus A H5 Asian RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "45175-7",
"display" : "HIV nucleoside reverse transcriptase gene mutations detected [Identifier]"
},
{
"code" : "45176-5",
"display" : "HIV nonnucleoside reverse transcriptase gene mutations detected [Identifier]"
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"code" : "47532-7",
"display" : "Mumps virus RNA [Presence] in Specimen by NAA with probe detection"
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"code" : "48508-6",
"display" : "Measles virus RNA [Presence] in Specimen by NAA with probe detection"
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"code" : "48509-4",
"display" : "Influenza virus A and B RNA [Identifier] in Specimen by NAA with probe detection"
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"display" : "HIV 1 RNA [Log #/volume] (viral load) in Serum or Plasma by Probe and target amplification method detection limit = 1.7 log copies/mL"
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"display" : "Adenovirus DNA [#/volume] (viral load) in Tissue by NAA with probe detection"
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"code" : "49340-3",
"display" : "Adenovirus DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "49351-0",
"display" : "Cytomegalovirus DNA [#/volume] (viral load) in Tissue by NAA with probe detection"
},
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"code" : "49381-7",
"display" : "Herpes simplex virus 1+2 DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
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"code" : "49382-5",
"display" : "Herpes simplex virus 1+2 DNA [#/volume] (viral load) in Tissue by NAA with probe detection"
},
{
"code" : "49390-8",
"display" : "Herpes virus 6 DNA [#/volume] (viral load) in Tissue by NAA with probe detection"
},
{
"code" : "49399-9",
"display" : "Herpes virus 7 DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "49403-9",
"display" : "Herpes virus 8 DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "49450-0",
"display" : "Varicella zoster virus DNA [#/volume] (viral load) in Tissue by NAA with probe detection"
},
{
"code" : "49451-8",
"display" : "Varicella zoster virus DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "49520-0",
"display" : "Influenza virus A H1 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "49521-8",
"display" : "Influenza virus A H1 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "49523-4",
"display" : "Influenza virus A H3 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "49524-2",
"display" : "Influenza virus A H3 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "49526-7",
"display" : "Influenza virus A H5 RNA [Presence] in Isolate by NAA with probe detection"
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{
"code" : "49527-5",
"display" : "Influenza virus A H7 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "49528-3",
"display" : "Influenza virus A H9 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "49531-7",
"display" : "Influenza virus A RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "49532-5",
"display" : "Influenza virus A hemagglutinin type RNA [Identifier] in Isolate by Sequencing"
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{
"code" : "49656-2",
"display" : "HIV protease gene mutations by Genotype method"
},
{
"code" : "49661-2",
"display" : "HIV protease gene mutations by Phenotype method"
},
{
"code" : "49890-7",
"display" : "HIV 1 RNA [Log #/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "4997-3",
"display" : "Cytomegalovirus DNA [Presence] in Tissue by Probe"
},
{
"code" : "4998-1",
"display" : "Cytomegalovirus DNA [Presence] in Tissue by NAA with probe detection"
},
{
"code" : "49986-3",
"display" : "Herpes simplex virus 1 DNA [#/volume] (viral load) in Body fluid by NAA with probe detection"
},
{
"code" : "49989-7",
"display" : "Herpes simplex virus 2 DNA [#/volume] (viral load) in Body fluid by NAA with probe detection"
},
{
"code" : "5000-5",
"display" : "Cytomegalovirus DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "5005-4",
"display" : "Epstein Barr virus DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "5014-6",
"display" : "Herpes simplex virus DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "5018-7",
"display" : "HIV 1 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "50547-9",
"display" : "Eastern equine encephalitis virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "50700-4",
"display" : "Influenza virus A.adamantane resistant RNA [Presence] by NAA with probe detection"
},
{
"code" : "50702-0",
"display" : "Influenza virus A matrix protein RNA [Presence] in Isolate by Sequencing"
},
{
"code" : "50704-6",
"display" : "Influenza virus A nucleoprotein RNA [Presence] in Isolate by Sequencing"
},
{
"code" : "50705-3",
"display" : "Influenza virus A non-structural protein RNA [Presence] in Isolate by Sequencing"
},
{
"code" : "50706-1",
"display" : "Influenza virus A polymerase A RNA [Presence] in Isolate by Sequencing"
},
{
"code" : "50707-9",
"display" : "Influenza virus A polymerase B1 cDNA [Presence] in Isolate by Sequencing"
},
{
"code" : "50708-7",
"display" : "Influenza virus A polymerase B2 RNA [Presence] in Isolate by Sequencing"
},
{
"code" : "50711-1",
"display" : "Influenza virus A polymerase RNA [Identifier] in Isolate by Sequencing"
},
{
"code" : "50790-5",
"display" : "HIV 1 RNA tropism [Identifier]"
},
{
"code" : "51646-8",
"display" : "Rabies virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "51647-6",
"display" : "Rabies virus RNA [Presence] in Specimen by Probe"
},
{
"code" : "51664-1",
"display" : "Chikungunya virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "51666-6",
"display" : "Japanese encephalitis virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "51667-4",
"display" : "Lymphocytic choriomeningitis virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "53250-7",
"display" : "Influenza virus A RNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "53251-5",
"display" : "Influenza virus B RNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "53252-3",
"display" : "Parainfluenza virus 1 RNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "53253-1",
"display" : "Parainfluenza virus 2 RNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "53254-9",
"display" : "Parainfluenza virus 3 RNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "53256-4",
"display" : "Enterovirus RNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "53763-9",
"display" : "Cytomegalovirus DNA [Log #/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "53774-6",
"display" : "Epstein Barr virus DNA [Log #/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "53798-5",
"display" : "HIV reverse transcriptase+protease gene mutations detected [Identifier]"
},
{
"code" : "53874-4",
"display" : "Jamestown canyon virus RNA [Units/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "54036-9",
"display" : "Western equine encephalitis virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "54091-4",
"display" : "Rubella virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "54243-1",
"display" : "Influenza virus RNA [Identifier] in Specimen by Probe"
},
{
"code" : "55133-3",
"display" : "Influenza virus A hemagglutinin cDNA [Identifier] in Isolate by NAA with probe detection"
},
{
"code" : "55134-1",
"display" : "Influenza virus A neuraminidase RNA [Identifier] in Isolate by NAA with probe detection"
},
{
"code" : "55143-2",
"display" : "California serogroup RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "55144-0",
"display" : "Powassan virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "55145-7",
"display" : "Saint Louis encephalitis virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "55463-4",
"display" : "Influenza virus A swine origin RNA [Identifier] in Specimen by NAA with probe detection"
},
{
"code" : "55464-2",
"display" : "Influenza virus A swine origin RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "55465-9",
"display" : "Influenza virus A H1 2009 pandemic RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "56024-3",
"display" : "Influenza virus A N1 RNA [Units/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "57985-4",
"display" : "Influenza virus A H2 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "59423-4",
"display" : "Influenza virus A hemagglutinin type RNA [Identifier] in Specimen by NAA with probe detection"
},
{
"code" : "59424-2",
"display" : "Influenza virus A hemagglutinin type RNA [Identifier] in Isolate by NAA with probe detection"
},
{
"code" : "60254-0",
"display" : "Parainfluenza virus 1+2+3 RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "60259-9",
"display" : "Adenovirus DNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "60263-1",
"display" : "Enterovirus RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "60270-6",
"display" : "Rabies virus RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "60422-3",
"display" : "Measles virus genotype [Identifier] in Specimen by NAA with probe detection"
},
{
"code" : "60429-8",
"display" : "Enterovirus 71 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "60461-1",
"display" : "Herpes simplex virus 1 DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "60462-9",
"display" : "Herpes simplex virus 2 DNA [#/volume] (viral load) in Specimen by NAA with probe detection"
},
{
"code" : "60494-2",
"display" : "Influenza virus A H1 2009 pandemic and Influenza virus A swine origin RNA [Interpretation] in Specimen Qualitative by NAA with probe detection"
},
{
"code" : "60528-7",
"display" : "Enterovirus subtype in Specimen by NAA with probe detection"
},
{
"code" : "60530-3",
"display" : "Influenza virus A H9 RNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "60538-6",
"display" : "Influenza virus A H1+H3+B RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "61101-2",
"display" : "Influenza virus A neuraminidase RNA [Type] in Specimen by Sequencing"
},
{
"code" : "61199-6",
"display" : "HIV 1 integrase gene mutations detected [Identifier]"
},
{
"code" : "61363-8",
"display" : "Adenovirus 3+4+7+21 DNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "61364-6",
"display" : "Echovirus+Coxsackievirus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "61365-3",
"display" : "Parainfluenza virus RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "62462-7",
"display" : "Influenza virus A+B RNA [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "62471-8",
"display" : "Herpes simplex virus 1 DNA [#/volume] (viral load) in Tissue by NAA with probe detection"
},
{
"code" : "62475-9",
"display" : "Herpes simplex virus 2 DNA [#/volume] (viral load) in Tissue by NAA with probe detection"
},
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},
"text" : {
}
}
XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.